The Molecular Expressions site contains a plethora of microscopy information, images and tutorials.
MicroscopyU is ran by Nikon. While providing information about Nikon microscopes it also provides detailed information and tutorials about basic microscpy and fluorecence concepts.
The Microscopy Resource Center is ran by Olympus. Like MicroscopyU it provides information about the companies equipment but also has a large collection of tutorials and interative java applets demonstrating microscopy concepts.
The human protein atlas shows expression and localization of proteins in a large variety of normal human tissues, cancer cells and cell lines with the aid of immunohistochemistry (IHC) images and immunofluorescence (IF) confocal microscopy images.
Developed by Molecular Devices, MetaMorph is an industry standard image analysis suite and capture platform.
Fiji is a free image processing package. It can be described as a distribution of ImageJ together with Java, Java 3D and a lot of plugins organized into a coherent menu structure. Fiji compares to ImageJ as Ubuntu compares to Linux.
Imaris is Bitplane’s core software module that delivers all the necessary functionality for visualization, segmentation and interpretation of 3D and 4D microscopy datasets. Combining speed, precision and ease-of-use, Imaris provides a complete set of features for working with three- and four-dimensional multi-channel images of any size, from a few megabytes to multiple gigabytes in size.
The most sophisticated of the suite of products, NIS-Elements AR is optimized for advanced research applications. It features fully automated acquisition and device control through full six-dimensional image acquisition and analysis.
The Fluourecence Imaging Group (FIG) of Victoria. FIG was formed to support and develop fluorecent imaging techniques.